Geneious Basic

Description

Geneious Basic is a software that speeds up and simplifies research in molecular biology and biochemistry. Geneious is a useful, unique and easy to use program system which has been designed to outstandingly speed up and simplify the research in molecular biology and biochemistry.
Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows any molecular biologist do core bioinformatics tasks in a flash by removing painful data-administration.Geneious Basic Features:
1. Organize and visualize - Organize, visualize and search sequences (with annotations), alignments, phylogenetic trees, publications, protein structures and more!
2. Database integration - Seamlessly integrated searching with Genbank, PubMed, BLAST and UniProt
3. Align and build trees - Basic pairwise alignment, multiple alignment and tree building methods including bootstrapping and consensus trees.
4. Import and Export - Import and export Newick, Nexus, FASTA and Endnote formats. Import PDF, 3D Structures, Vector NTI, Chromatograms, DNA Strider, Clusta
5. Plugins - Free plugins for extended functionality, Public Java API (application programming interface) for developing your own pluginsMore Geneious Pro Features:
1. Advanced sequence viewing - Circular sequences and plasmid mapping. Consensus, translation and complement along-side sequences.
2. Contig assembly - Automated contig assembly, sequence trimming, vector screening and easy contig editing
3. Primers - designing and testing, degenerate primers, mismatches and multiple primer searching. (Includes program developed by the Whitehead Institute for Biomedical Research)
4. Cloning - One-step insertion into a plasmid, find and view restriction cut sites, perform restriction enzyme digests and ligate fragments.
5. Sequence editing - Edit sequences, sequence alignments and annotations
6. Collaborate - Share documents and chat with other users of Geneious Pro from anywhere in the world
7. Server Data Storage - Store data on a secure relational database (SQL, Oracle etc.) where multiple users can work with the data concurrently.
8. Agents and smart agents - Agents keep your data up to date while smart agents learn about the documents you are interested in and find more for you!
9. Sequence graphs - Sequence logo graph, view and edit chromatogram sequences.
10. Extended connectivity - Create custom BLAST databases. Seamless integration with Pfam, NCBI Gene and NCBI SNP databases.
11. Advanced alignment - MUSCLE, ClustalW, translation aignment, profile alignment and consensus alignment
12. Pro only Plugins - PAUP*, EMBOSS, Mauve genome alignment and more
13. Motifs and ORFs - Quickly identify and annotate motifs and open reading frames
14. Geneious education - Create and use interactive tutorials for learning within Geneious
15. Interoperability - Import formats from other tools like DNAStar, PIR, EMBL, GCG and Phylip, list of formats
16. Chromosome viewing - Load, view, edit full human chromosomes or up to 10,000 HIV genomes
17. Publication images - Publication quality image export to vector graphic formats

Best Bioinformatics Software - Using Software For Blast Searches On Ncbi - Sequence Alignment - Cloning - Phylogenetic - Primer Structure - Assembly Protein - Best - Dna - Sequencing - Analysis - And - Multiple - Sequence - Alignment - Software - Software For Phylogenetics - Buy

Published By:geneious.com

License Type:Freeware

Date Added:18 July, 2012

Version:5.6.4

Price:Free

Downloads:7

Size:50.2 MB

Platform: Macintosh

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